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Gold in PDB 4y2m: Apo-Golb Protein

Protein crystallography data

The structure of Apo-Golb Protein, PDB code: 4y2m was solved by W.Wei, J.Zhao, F.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.48 / 1.40
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 36.993, 36.993, 169.761, 90.00, 90.00, 120.00
R / Rfree (%) 17.6 / 19.8

Gold Binding Sites:

The binding sites of Gold atom in the Apo-Golb Protein (pdb code 4y2m). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total only one binding site of Gold was determined in the Apo-Golb Protein, PDB code: 4y2m:

Gold binding site 1 out of 1 in 4y2m

Go back to Gold Binding Sites List in 4y2m
Gold binding site 1 out of 1 in the Apo-Golb Protein


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Apo-Golb Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au101

b:32.6
occ:0.26
NZ A:LYS18 3.0 27.7 0.5
N A:VAL30 3.0 21.1 1.0
O A:HOH201 3.1 19.0 1.0
O A:VAL30 3.3 31.0 1.0
CE A:LYS18 3.3 25.1 0.5
CA A:THR29 3.8 19.8 1.0
C A:THR29 3.8 21.4 1.0
CA A:VAL30 3.9 17.9 1.0
C A:VAL30 4.0 22.5 1.0
CB A:VAL30 4.0 19.5 1.0
O A:ALA28 4.1 22.1 1.0
NH2 A:ARG31 4.3 56.6 1.0
CG2 A:VAL30 4.4 25.0 1.0
CD A:LYS18 4.5 22.3 0.5
CD2 A:LEU22 4.5 17.1 1.0
CG2 A:THR29 4.5 30.2 1.0
CB A:THR29 4.7 25.8 1.0
N A:THR29 4.8 17.4 1.0
CD1 A:LEU22 4.9 16.6 1.0
C A:ALA28 4.9 17.1 1.0
O A:HOH203 4.9 18.6 0.9
CG A:LYS18 5.0 18.4 0.5

Reference:

W.Wei, Y.Sun, M.Zhu, X.Liu, P.Sun, F.Wang, Q.Gui, W.Meng, Y.Cao, J.Zhao. Structural Insights and the Surprisingly Low Mechanical Stability of the Au-S Bond in the Gold-Specific Protein Golb J.Am.Chem.Soc. V. 137 15358 2015.
ISSN: ESSN 1520-5126
PubMed: 26636614
DOI: 10.1021/JACS.5B09895
Page generated: Sat Dec 12 01:54:11 2020

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