Gold in PDB 4ovb: Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative

The structure of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative, PDB code: 4ovb was solved by P.Maindola, P.Goyal, A.Arulandu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.49 / 2.03
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	60.997, 60.997, 126.948, 90.00, 90.00, 90.00
R / Rfree (%)	19.1 / 23.4

The binding sites of Gold atom in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative (pdb code 4ovb). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total 9 binding sites of Gold where determined in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative, PDB code: 4ovb:
Jump to Gold binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Gold binding site 1 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au203 b:39.5 occ:0.84 AU A:AUC203 0.0 39.5 0.8 C1 A:AUC203 2.1 30.5 0.8 C2 A:AUC203 2.2 39.1 0.8 N1 A:AUC203 3.3 34.0 0.8 N2 A:AUC203 3.3 40.5 0.8 CG A:HIS107 3.6 38.6 1.0 NH1 A:ARG140 3.7 30.4 1.0 CD2 A:HIS107 3.7 38.9 1.0 CB A:HIS107 3.8 36.4 1.0 CG1 A:VAL116 3.8 31.4 1.0 CZ A:ARG140 3.8 32.3 1.0 NH2 A:ARG140 3.8 33.6 1.0 ND1 A:HIS107 4.0 43.1 1.0 NE2 A:HIS107 4.2 42.1 1.0 O A:HOH397 4.4 37.0 1.0 CD A:PRO117 4.4 30.5 1.0 CE1 A:HIS107 4.4 39.5 1.0 CG2 A:VAL116 4.5 31.2 1.0 NE A:ARG140 4.6 30.5 1.0 CB A:VAL116 4.6 31.1 1.0 O A:HOH358 4.8 40.1 1.0 CA A:VAL116 4.9 31.0 1.0

Gold binding site 2 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 2 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au204 b:72.6 occ:0.44 AU A:AUC204 0.0 72.6 0.4 C2 A:AUC204 2.1 47.6 0.4 C1 A:AUC204 2.1 42.0 0.4 AU A:AUC205 3.0 62.2 0.5 C2 A:AUC205 3.1 45.4 0.5 N2 A:AUC205 3.7 45.7 0.5 CD1 A:ILE175 4.4 34.2 1.0

Gold binding site 3 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 3 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au205 b:62.2 occ:0.45 AU A:AUC205 0.0 62.2 0.5 C2 A:AUC205 2.1 45.4 0.5 AU A:AUC204 3.0 72.6 0.4 CD1 A:ILE175 3.2 34.2 1.0 CG A:GLN183 3.3 38.1 1.0 N2 A:AUC205 3.3 45.7 0.5 C2 A:AUC204 3.4 47.6 0.4 CB A:GLN183 3.5 42.0 1.0 CD1 A:LEU180 3.8 37.9 1.0 C1 A:AUC204 4.0 42.0 0.4 CA A:LEU180 4.6 34.9 1.0 CG1 A:ILE175 4.6 31.4 1.0 O A:LYS179 4.6 34.8 1.0

Gold binding site 4 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 4 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au206 b:39.0 occ:0.24 AU A:AUC206 0.0 39.0 0.2 C2 A:AUC206 2.1 27.8 0.2 N2 A:AUC206 3.3 29.4 0.2 CE2 A:TYR68 3.3 28.8 1.0 CD2 A:TYR68 3.4 27.7 1.0 CZ A:TYR68 3.5 29.7 1.0 CG A:TYR68 3.6 27.4 1.0 CE1 A:TYR68 3.7 27.1 1.0 CD1 A:TYR68 3.7 27.9 1.0 CD A:PRO31 4.1 28.8 1.0 OH A:TYR68 4.2 29.9 1.0 O A:PRO31 4.2 28.3 1.0 CB A:LEU30 4.3 31.6 1.0 CB A:TYR68 4.4 26.2 1.0 CD1 A:LEU30 4.4 35.8 1.0 O A:HOH389 4.5 44.5 1.0 CG A:PRO31 4.6 27.2 1.0 CD2 A:LEU30 4.7 29.6 1.0 O A:HOH336 4.7 38.0 1.0 CG A:LEU30 4.7 33.5 1.0 N A:PRO31 4.8 27.8 1.0 CB A:PRO31 5.0 29.3 1.0

Gold binding site 5 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 5 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au207 b:57.7 occ:0.29 O A:TRP38 2.9 62.0 1.0 C A:TRP38 3.8 59.2 1.0 CB A:ASN39 4.3 60.7 1.0 N A:ASN39 4.5 56.0 1.0 CA A:ASN39 4.5 59.5 1.0 CA A:TRP38 4.7 59.8 1.0 N A:TRP38 4.9 62.4 1.0

Gold binding site 6 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 6 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au208 b:44.7 occ:0.34 O A:THR135 2.7 28.2 1.0 O A:HOH312 3.2 44.5 1.0 C A:THR135 3.3 30.5 1.0 O A:HOH322 3.3 36.5 1.0 NE2 A:GLN87 3.5 28.0 1.0 O A:PHE134 3.8 27.1 1.0 N A:ASP136 3.9 28.7 1.0 CA A:ASP136 3.9 29.8 1.0 CA A:THR135 4.1 29.6 1.0 C A:PHE134 4.1 25.7 1.0 CE A:MET138 4.3 32.7 1.0 CB A:PHE134 4.3 25.7 1.0 N A:THR135 4.4 26.1 1.0 CD A:GLN87 4.6 29.5 1.0 CB A:ASP136 4.8 29.3 1.0 C A:ASP136 4.9 30.0 1.0 CA A:PHE134 4.9 25.9 1.0

Gold binding site 7 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 7 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au209 b:72.0 occ:0.54 O A:GLU40 3.0 44.0 1.0 C A:GLU40 3.4 44.3 1.0 N A:GLU40 3.7 53.3 1.0 ND2 A:ASN36 3.9 48.9 1.0 CA A:GLU40 3.9 47.3 1.0 C A:ASN39 3.9 58.4 1.0 CB A:CYS184 4.0 36.4 1.0 N A:VAL41 4.1 39.0 1.0 O A:HOH319 4.1 38.0 1.0 O A:ASN39 4.4 57.0 1.0 CA A:ASN39 4.5 59.5 1.0 CG A:ARG185 4.5 43.3 1.0 CA A:VAL41 4.6 35.7 1.0 OD1 A:ASN36 4.6 54.7 1.0 CG A:ASN36 4.7 52.0 1.0 N A:ARG185 4.9 43.8 1.0 O A:ARG181 4.9 43.2 1.0 CG2 A:VAL41 4.9 34.4 1.0 C A:CYS184 5.0 47.6 1.0

Gold binding site 8 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 8 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au210 b:49.7 occ:0.38 AU A:AUC211 2.9 54.9 0.2 O A:ASN36 3.9 57.3 1.0 CB A:PRO35 4.0 44.5 1.0 N A:ASN36 4.0 48.2 1.0 CA A:PRO35 4.4 39.7 1.0 C A:PRO35 4.4 44.3 1.0 C A:ASN36 4.5 58.6 1.0 CA A:ASN36 4.8 53.5 1.0 O A:LEU188 4.8 49.2 1.0

Gold binding site 9 out of 9 in the Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 9 of Crystal Structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility Inhibition Factor, Gold (I) Cyanide Derivative within 5.0Å range: probe atom residue distance (Å) B Occ A:Au211 b:54.9 occ:0.19 O A:LEU188 2.8 49.2 1.0 AU A:AUC210 2.9 49.7 0.4 OXT A:LEU188 3.0 58.5 1.0 C A:LEU188 3.2 50.9 1.0 O A:HOH347 3.9 49.5 1.0 CA A:LEU188 4.5 49.6 1.0 O A:HOH357 4.7 44.9 1.0 CB A:LEU188 4.9 49.8 1.0 CB A:PRO35 4.9 44.5 1.0

P.Maindola, P.Goyal, A.Arulandu. Multiple Enzymatic Activities of Parb/Srx Superfamily Mediate Sexual Conflict Among Conjugative Plasmids To Be Published.