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Gold in PDB 3l47: Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A

Protein crystallography data

The structure of Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A, PDB code: 3l47 was solved by H.Ren, S.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 2.51
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.871, 37.920, 43.889, 90.00, 98.92, 90.00
R / Rfree (%) 18 / 22.6

Gold Binding Sites:

The binding sites of Gold atom in the Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A (pdb code 3l47). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total 2 binding sites of Gold where determined in the Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A, PDB code: 3l47:
Jump to Gold binding site number: 1; 2;

Gold binding site 1 out of 2 in 3l47

Go back to Gold Binding Sites List in 3l47
Gold binding site 1 out of 2 in the Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au1

b:24.8
occ:1.00
ND1 A:HIS60 2.2 19.6 1.0
CG A:HIS60 3.1 20.0 1.0
CE1 A:HIS60 3.2 19.9 1.0
CB A:HIS60 3.3 18.1 1.0
CA A:PRO57 3.6 18.5 1.0
CB A:GLU119 3.9 21.2 1.0
CB A:PRO57 4.0 20.4 1.0
CA A:GLU119 4.0 19.0 1.0
O A:HOH164 4.0 27.9 1.0
N A:GLU119 4.1 18.9 1.0
O A:PRO57 4.2 19.8 1.0
OD2 A:ASP116 4.2 21.4 1.0
CD2 A:HIS60 4.3 21.7 1.0
O A:HOH177 4.3 25.3 1.0
OE1 A:GLU119 4.3 27.5 1.0
NE2 A:HIS60 4.3 21.1 1.0
C A:PRO57 4.4 19.3 1.0
N A:PRO57 4.5 19.8 1.0
CB A:CYS118 4.5 19.3 1.0
C A:CYS118 4.6 20.0 1.0
CG A:PRO57 4.6 21.4 1.0
CG A:GLU119 4.7 20.5 1.0
CG A:ASP116 4.8 21.8 1.0
CA A:HIS60 4.8 18.9 1.0
CD A:GLU119 4.9 26.7 1.0
O A:ASP56 4.9 21.2 1.0
C A:ASP56 5.0 20.1 1.0
O A:CYS118 5.0 17.6 1.0
OD1 A:ASP116 5.0 23.6 1.0

Gold binding site 2 out of 2 in 3l47

Go back to Gold Binding Sites List in 3l47
Gold binding site 2 out of 2 in the Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 2 of Crystal Structure of the Anopheles Gambiae Odorant-Binding Protein 22A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au2

b:61.7
occ:0.56
NE2 A:HIS47 2.4 36.4 1.0
CE1 A:HIS47 2.8 38.1 1.0
CD2 A:HIS47 3.6 34.4 1.0
OE2 A:GLU43 3.8 43.5 1.0
ND1 A:HIS47 4.0 37.2 1.0
CG A:GLU43 4.1 36.4 1.0
CD A:GLU43 4.4 39.7 1.0
CG A:HIS47 4.5 34.7 1.0

Reference:

H.Ren, G.Yang, G.Winberg, L.Turin, A.Mershin, S.Zhang. The Crystal Structures of An Anopheles Gambiae Odorant-Binding Protein AGAMOBP22A and Complexes with Bound Odorants To Be Published.
Page generated: Sat Dec 12 01:53:44 2020

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