Gold in PDB 8dxv: [T:Au+:T--(PH11-PH7; 5S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 5S

The structure of [T:Au+:T--(PH11-PH7; 5S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 5S, PDB code: 8dxv was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.38 / 4.59
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	107.175, 107.175, 91.374, 90, 90, 120
R / Rfree (%)	18.4 / 23.8

The binding sites of Gold atom in the [T:Au+:T--(PH11-PH7; 5S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 5S (pdb code 8dxv). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total only one binding site of Gold was determined in the [T:Au+:T--(PH11-PH7; 5S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 5S, PDB code: 8dxv:

Gold binding site 1 out of 1 in the [T:Au+:T--(PH11-PH7; 5S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 5S


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of [T:Au+:T--(PH11-PH7; 5S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 5S within 5.0Å range: probe atom residue distance (Å) B Occ B:Au101 b:227.3 occ:0.42 O4 A:DT12 2.2 205.7 1.0 N3 B:DT4 2.2 181.6 1.0 O4 B:DT4 2.8 175.6 1.0 C4 A:DT12 2.8 205.7 1.0 N3 A:DT12 2.8 202.6 1.0 C4 B:DT4 2.8 187.0 1.0 C2 B:DT4 3.2 188.3 1.0 N1 B:DA5 3.4 197.0 1.0 O2 B:DT4 3.4 186.2 1.0 C2 B:DA5 3.5 196.2 1.0 C6 B:DA5 3.7 195.6 1.0 N1 B:DA3 3.7 182.3 1.0 C6 B:DA3 3.9 177.7 1.0 N6 B:DA3 4.0 176.3 1.0 N3 B:DA5 4.0 195.1 1.0 C5 B:DA5 4.1 192.3 1.0 C2 A:DT12 4.1 201.7 1.0 C4 B:DA5 4.2 191.6 1.0 C5 A:DT12 4.2 205.4 1.0 N6 B:DA5 4.2 194.4 1.0 C5 B:DT4 4.2 184.6 1.0 C2 B:DA3 4.3 184.7 1.0 N1 B:DT4 4.4 194.6 1.0 N3 A:DT13 4.5 193.2 1.0 O4 A:DT13 4.6 193.3 1.0 C4 A:DT13 4.6 193.0 1.0 O2 A:DT12 4.6 194.0 1.0 O4 A:DT11 4.6 205.8 1.0 C5 B:DA3 4.7 178.0 1.0 C6 B:DT4 4.8 189.4 1.0 N3 A:DT11 4.9 200.4 1.0 C7 A:DT12 5.0 201.4 1.0

B.Lu, Y.P.Ohayon, R.Sha, K.Woloszyn, L.Rothschild, S.Wind, W.Hendrickson, C.Mao, N.C.Seeman, S.Vecchioni. Crystallographic pH Titration of Silver and Mercury Mediated Dna Base Pairs To Be Published.