Gold in PDB 8dxz: [T:Au+:T--(PH11-PH7; 420S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 420S

The structure of [T:Au+:T--(PH11-PH7; 420S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 420S, PDB code: 8dxz was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.01 / 4.71
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	106.037, 106.037, 94.98, 90, 90, 120
R / Rfree (%)	15.1 / 15.8

The binding sites of Gold atom in the [T:Au+:T--(PH11-PH7; 420S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 420S (pdb code 8dxz). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total only one binding site of Gold was determined in the [T:Au+:T--(PH11-PH7; 420S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 420S, PDB code: 8dxz:

Gold binding site 1 out of 1 in the [T:Au+:T--(PH11-PH7; 420S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 420S


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of [T:Au+:T--(PH11-PH7; 420S)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 For 420S within 5.0Å range: probe atom residue distance (Å) B Occ B:Au101 b:270.9 occ:0.12 N3 B:DT4 1.7 217.7 1.0 N3 A:DT12 2.0 197.7 1.0 O4 A:DT12 2.4 195.6 1.0 C2 B:DA5 2.4 274.5 1.0 C4 A:DT12 2.5 196.7 1.0 N1 B:DA5 2.5 269.4 1.0 C2 B:DT4 2.6 224.0 1.0 C4 B:DT4 2.6 207.0 1.0 O2 B:DT4 2.9 232.8 1.0 N3 B:DA5 2.9 248.5 1.0 O4 B:DT4 2.9 201.3 1.0 C6 B:DA5 3.1 261.6 1.0 C2 A:DT12 3.2 199.5 1.0 C4 B:DA5 3.4 252.5 1.0 C5 B:DA5 3.5 258.4 1.0 O2 A:DT12 3.6 200.9 1.0 N1 B:DA3 3.8 158.5 1.0 C5 A:DT12 3.8 197.5 1.0 N1 B:DT4 3.9 217.1 1.0 C5 B:DT4 3.9 205.5 1.0 N6 B:DA5 3.9 266.1 1.0 C2 B:DA3 4.3 162.1 1.0 N1 A:DT12 4.3 199.9 1.0 C6 B:DT4 4.3 204.5 1.0 C6 B:DA3 4.3 158.7 1.0 N3 A:DT13 4.4 177.3 1.0 N9 B:DA5 4.5 265.9 1.0 N6 B:DA3 4.5 155.4 1.0 C6 A:DT12 4.5 198.9 1.0 O4 A:DT11 4.6 203.4 1.0 O2 A:DT13 4.6 179.8 1.0 C2 A:DT13 4.6 179.1 1.0 N7 B:DA5 4.7 261.8 1.0 C7 A:DT12 4.9 197.3 1.0 C4 A:DT11 5.0 211.9 1.0 C4 A:DT13 5.0 177.1 1.0

B.Lu, Y.P.Ohayon, R.Sha, K.Woloszyn, L.Rothschild, S.Wind, W.Hendrickson, C.Mao, N.C.Seeman, S.Vecchioni. Crystallographic pH Titration of Silver and Mercury Mediated Dna Base Pairs To Be Published.