Gold in PDB 7ff9: Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)

The structure of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I), PDB code: 7ff9 was solved by B.L.A.Chew, D.Luo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.53 / 2.40
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	49.738, 87.615, 104.973, 79.04, 77.87, 75.4
R / Rfree (%)	26.4 / 29.3

The structure of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) also contains other interesting chemical elements:

Chlorine

(Cl)

14 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 31;

Binding sites:

The binding sites of Gold atom in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) (pdb code 7ff9). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total 31 binding sites of Gold where determined in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I), PDB code: 7ff9:
Jump to Gold binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Gold binding site 1 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Au302 b:59.3 occ:1.00 HG21 A:VAL144 2.6 20.7 1.0 SG A:CYS183 2.9 33.7 1.0 HA A:CYS183 3.5 26.5 1.0 CL B:CL307 3.5 52.5 1.0 CG2 A:VAL144 3.5 24.6 1.0 HG A:CYS183 3.7 30.1 1.0 HG23 A:VAL144 3.8 20.7 1.0 HB2 A:CYS183 3.9 27.1 1.0 CB A:CYS183 3.9 31.7 1.0 HG11 A:VAL144 4.0 20.6 1.0 HG22 A:VAL144 4.0 20.7 1.0 CL A:CL306 4.1 15.8 1.0 O A:GLY182 4.1 29.1 1.0 CA A:CYS183 4.2 31.7 1.0 HB A:VAL144 4.4 20.9 1.0 CB A:VAL144 4.5 24.6 1.0 H A:SER184 4.5 25.8 1.0 CG1 A:VAL144 4.7 23.9 1.0 HB3 A:CYS183 4.8 27.1 1.0 HB2 A:MET187 4.8 25.4 1.0 HG3 A:MET187 4.9 28.5 1.0 C A:GLY182 4.9 29.2 1.0 HB3 A:MET187 5.0 25.4 1.0 N A:CYS183 5.0 32.4 1.0

Gold binding site 2 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 2 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Au303 b:56.8 occ:1.00 HB3 A:CYS156 2.5 25.9 1.0 HG3 A:GLN157 2.7 36.4 1.0 SG A:CYS156 2.7 44.3 1.0 O A:HOH478 2.9 22.6 1.0 CB A:CYS156 3.1 29.9 1.0 HG3 A:MET168 3.2 26.1 1.0 HG2 A:GLN157 3.3 36.4 1.0 CG A:GLN157 3.4 35.4 1.0 C A:CYS156 3.5 33.7 1.0 N A:GLN157 3.5 30.7 1.0 HA A:GLN157 3.6 29.5 1.0 O A:HOH479 3.7 38.6 1.0 H A:GLN157 3.8 31.2 1.0 O A:CYS156 3.8 33.2 1.0 CA A:CYS156 3.9 29.8 1.0 HB2 A:CYS156 3.9 25.9 1.0 CL A:CL307 3.9 40.7 1.0 CA A:GLN157 4.0 31.1 1.0 CG A:MET168 4.1 31.3 1.0 O A:HOH475 4.2 36.1 1.0 CB A:GLN157 4.3 32.8 1.0 HA A:CYS156 4.3 25.7 1.0 HG2 A:MET168 4.4 26.1 1.0 CD A:GLN157 4.5 37.0 1.0 HB2 A:MET168 4.6 25.7 1.0 O A:LEU153 4.8 31.9 1.0 HB3 A:GLN157 4.8 31.7 1.0 HA A:LEU153 4.9 24.4 1.0 HE21 A:GLN157 4.9 36.3 1.0 CB A:MET168 5.0 30.1 1.0 HB2 A:GLN157 5.0 31.7 1.0 SD A:MET168 5.0 33.1 1.0

Gold binding site 3 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 3 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Au304 b:85.1 occ:1.00 SG A:CYS20 2.4 58.1 1.0 HB2 A:CYS20 2.5 43.3 1.0 CB A:CYS20 2.8 53.0 1.0 HB3 A:CYS20 3.0 43.3 1.0 O A:LEU17 3.2 68.7 1.0 HB2 A:ALA100 3.6 27.2 1.0 HB1 A:ALA100 3.7 27.2 1.0 O A:HOH477 3.8 45.9 1.0 CB A:ALA100 4.0 32.7 1.0 HB3 A:ALA100 4.1 27.2 1.0 O A:HOH457 4.2 46.6 1.0 CA A:CYS20 4.3 57.1 1.0 C A:LEU17 4.4 69.1 1.0 O A:ALA18 4.5 64.6 1.0 O A:HOH462 4.5 44.6 1.0 HD11 A:ILE45 4.6 23.1 1.0 HD11 A:ILE102 4.6 33.3 1.0 O A:LYS15 4.6 59.2 1.0 N A:CYS20 4.7 63.7 1.0 HA A:CYS20 4.7 48.7 1.0 H A:LEU17 4.8 49.0 1.0 O A:HIS19 4.9 59.8 1.0 C A:HIS19 5.0 61.2 1.0 N A:LEU17 5.0 64.3 1.0

Gold binding site 4 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 4 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Au305 b:85.8 occ:1.00 O A:HOH452 2.6 30.8 1.0 HB2 A:CYS38 2.8 38.4 1.0 SG A:CYS38 2.8 52.0 1.0 O A:HOH472 3.1 30.7 1.0 CB A:CYS38 3.2 37.4 1.0 HB3 A:CYS38 3.4 38.4 1.0 O A:HOH402 3.9 32.4 1.0 HH21 A:ARG87 4.3 28.1 1.0 HB3 A:ASP36 4.3 26.3 1.0 HG1 A:THR40 4.3 31.2 1.0 OD2 A:ASP36 4.4 31.2 1.0 OG1 A:THR40 4.4 34.5 1.0 HE A:ARG87 4.5 25.4 1.0 CA A:CYS38 4.6 35.5 1.0 O A:HOH455 4.7 34.7 1.0 HA A:CYS38 4.9 35.5 1.0 CG A:ASP36 5.0 31.5 1.0 CB A:ASP36 5.0 27.5 1.0

Gold binding site 5 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 5 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Au302 b:110.8 occ:1.00 HG B:CYS20 2.3 54.4 1.0 SG B:CYS20 2.7 72.7 1.0 HB2 B:CYS20 2.7 46.5 1.0 HD12 B:LEU17 2.7 28.8 1.0 CB B:CYS20 3.2 63.3 1.0 CD1 B:LEU17 3.7 96.6 1.0 HB3 B:CYS20 3.9 46.5 1.0 HA B:CYS20 3.9 44.8 1.0 HD13 B:LEU17 4.0 28.8 1.0 HA B:LEU17 4.1 47.6 1.0 HB3 B:LEU17 4.1 28.8 1.0 CA B:CYS20 4.1 59.8 1.0 HD11 B:LEU17 4.2 28.8 1.0 HG B:LEU17 4.3 28.8 1.0 CG B:LEU17 4.4 92.8 1.0 H B:CYS20 4.6 47.6 1.0 CB B:LEU17 4.6 87.1 1.0 N B:CYS20 4.6 56.7 1.0 CA B:LEU17 4.8 66.3 1.0

Gold binding site 6 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 6 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Au303 b:111.2 occ:1.00 SG B:CYS38 2.6 46.5 1.0 HA B:CYS38 3.3 33.0 1.0 H B:GLU39 3.5 32.9 1.0 CB B:CYS38 3.7 39.5 1.0 HB2 B:CYS38 3.9 37.9 1.0 CA B:CYS38 4.0 36.7 1.0 HG22 B:THR40 4.2 29.3 1.0 N B:GLU39 4.3 32.9 1.0 O B:HOH450 4.4 34.4 1.0 HB3 B:CYS38 4.6 37.9 1.0 C B:CYS38 4.7 36.6 1.0 HG21 B:THR40 4.7 29.3 1.0 O B:ARG37 4.8 40.6 1.0 CG2 B:THR40 4.9 36.2 1.0

Gold binding site 7 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 7 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Au304 b:96.7 occ:1.00 HB3 B:CYS156 2.3 40.2 1.0 SG B:CYS156 2.4 48.0 1.0 CB B:CYS156 2.6 42.4 1.0 HB2 B:CYS156 2.8 40.2 1.0 HG3 B:MET168 3.3 29.6 1.0 CL B:CL308 3.4 26.6 1.0 HA B:LEU153 3.6 35.3 1.0 HB2 B:MET168 3.6 29.8 1.0 HD23 B:LEU153 3.8 40.5 1.0 HB B:VAL210 3.8 35.1 1.0 HG11 B:VAL210 4.0 36.6 1.0 CG B:MET168 4.0 38.8 1.0 CA B:CYS156 4.1 42.1 1.0 HG2 B:MET168 4.1 29.6 1.0 HD22 B:LEU153 4.2 40.5 1.0 CB B:MET168 4.3 37.6 1.0 HA B:CYS156 4.4 39.2 1.0 CD2 B:LEU153 4.4 41.2 1.0 HG12 B:VAL210 4.5 36.6 1.0 CA B:LEU153 4.5 39.2 1.0 CG1 B:VAL210 4.5 39.9 1.0 CB B:VAL210 4.6 41.2 1.0 HG21 B:VAL210 4.7 33.6 1.0 HB3 B:LEU153 4.7 31.0 1.0 H B:CYS156 4.7 36.8 1.0 HB3 B:MET168 4.7 29.8 1.0 O B:LEU153 4.8 42.7 1.0 O B:LEU152 4.8 37.0 1.0 C B:CYS156 4.8 44.3 1.0 N B:CYS156 5.0 40.1 1.0

Gold binding site 8 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 8 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Au305 b:52.9 occ:1.00 CL B:CL309 2.2 47.3 1.0 SG B:CYS183 2.4 35.8 1.0 HH12 B:ARG59 2.8 48.4 1.0 HA B:CYS183 2.9 31.5 1.0 HH11 B:ARG59 3.0 48.4 1.0 NH1 B:ARG59 3.1 54.0 1.0 HG B:CYS183 3.2 34.0 1.0 HG21 B:VAL144 3.3 26.2 1.0 CB B:CYS183 3.3 30.6 1.0 HB2 B:CYS183 3.4 24.8 1.0 H B:SER184 3.5 29.6 1.0 CA B:CYS183 3.5 34.6 1.0 HG11 B:VAL144 3.7 31.7 1.0 CZ B:ARG59 4.1 57.0 1.0 O B:GLY182 4.1 36.0 1.0 CG2 B:VAL144 4.2 27.9 1.0 N B:SER184 4.2 33.9 1.0 HB3 B:CYS183 4.2 24.8 1.0 HD3 B:ARG59 4.3 41.2 1.0 HG22 B:VAL144 4.3 26.2 1.0 C B:CYS183 4.4 34.9 1.0 HH22 B:ARG59 4.5 52.1 1.0 CG1 B:VAL144 4.5 30.3 1.0 N B:CYS183 4.6 33.4 1.0 NH2 B:ARG59 4.7 58.0 1.0 CB B:MET187 4.7 33.9 1.0 HG23 B:VAL144 4.8 26.2 1.0 HG13 B:VAL144 4.8 31.7 1.0 C B:GLY182 4.8 33.4 1.0 OG B:SER184 4.9 35.4 1.0 NE B:ARG59 4.9 53.4 1.0 CB B:VAL144 4.9 28.6 1.0

Gold binding site 9 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 9 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Au306 b:114.2 occ:1.00 O B:HOH450 2.4 34.4 1.0 SG B:CYS38 3.1 46.5 1.0 HB2 B:CYS38 3.1 37.9 1.0 HB3 B:CYS38 3.1 37.9 1.0 HH21 B:ARG87 3.2 23.1 1.0 CB B:CYS38 3.3 39.5 1.0 HE B:ARG87 4.0 23.7 1.0 NH2 B:ARG87 4.0 26.6 1.0 HZ B:PHE42 4.1 24.7 1.0 O B:HOH406 4.1 23.1 1.0 HG23 B:THR40 4.2 29.3 1.0 HG21 B:THR40 4.4 29.3 1.0 HG22 B:THR40 4.4 29.3 1.0 HH22 B:ARG87 4.5 23.1 1.0 CG2 B:THR40 4.6 36.2 1.0 HG12 B:ILE32 4.6 20.0 1.0 NE B:ARG87 4.7 26.7 1.0 CA B:CYS38 4.8 36.7 1.0 CZ B:ARG87 4.9 27.0 1.0 HB3 B:ASP36 4.9 25.3 1.0 CZ B:PHE42 5.0 29.2 1.0 HA B:ILE32 5.0 20.3 1.0 HE1 B:PHE42 5.0 24.0 1.0

Gold binding site 10 out of 31 in the Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I)


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 10 of Pseudomonas Aeruginosa Virulence Factor Regulator with Camp Ligand and Cl(Triethylphosphine)Gold(I) within 5.0Å range: probe atom residue distance (Å) B Occ C:Au303 b:64.1 occ:1.00 HG C:CYS156 1.6 43.0 1.0 SG C:CYS156 2.2 40.4 1.0 O C:HOH504 2.6 31.2 1.0 O C:HOH499 2.7 29.3 1.0 HG3 C:GLN157 2.7 38.1 1.0 HG3 C:MET168 3.2 25.0 1.0 HG2 C:GLN157 3.3 38.1 1.0 O C:HOH469 3.4 31.3 1.0 HB3 C:CYS156 3.4 32.2 1.0 CG C:GLN157 3.4 37.6 1.0 CB C:CYS156 3.5 33.5 1.0 HA C:GLN157 3.6 36.3 1.0 HE2 C:MET168 3.7 22.1 1.0 N C:GLN157 3.8 35.8 1.0 C C:CYS156 3.8 35.0 1.0 O C:HOH484 3.9 26.4 1.0 H C:GLN157 4.0 35.4 1.0 O C:CYS156 4.0 38.3 1.0 CA C:GLN157 4.1 37.3 1.0 CG C:MET168 4.1 29.9 1.0 HE21 C:GLN157 4.2 40.8 1.0 HB2 C:CYS156 4.2 32.2 1.0 CA C:CYS156 4.2 33.1 1.0 CL C:CL308 4.3 34.7 1.0 O C:HOH501 4.3 32.4 1.0 CB C:GLN157 4.3 35.0 1.0 HG2 C:MET168 4.4 25.0 1.0 CD C:GLN157 4.5 40.0 1.0 CE C:MET168 4.6 29.5 1.0 NE2 C:GLN157 4.7 37.5 1.0 HA C:CYS156 4.7 30.7 1.0 O C:LEU153 4.8 31.2 1.0 HB3 C:GLN157 4.8 32.7 1.0 SD C:MET168 4.9 32.3 1.0 HB2 C:MET168 4.9 25.5 1.0 HE3 C:MET168 4.9 22.1 1.0 O C:HOH503 5.0 27.7 1.0

B.L.A.Chew, D.Luo, L.Yang. Inhibitory Mechanism of Gold Analogues Against Pseudomonas Global Virulence Factor Regulator Vfr To Be Published.