Gold in PDB 7edv: Dna Duplex Containing C-G-Au-C Base Triple

The structure of Dna Duplex Containing C-G-Au-C Base Triple, PDB code: 7edv was solved by J.Kondo, E.Iwase, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.18 / 2.01
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	38.595, 38.595, 46.688, 90, 90, 120
R / Rfree (%)	16.4 / 19.1

The binding sites of Gold atom in the Dna Duplex Containing C-G-Au-C Base Triple (pdb code 7edv). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total only one binding site of Gold was determined in the Dna Duplex Containing C-G-Au-C Base Triple, PDB code: 7edv:

Gold binding site 1 out of 1 in the Dna Duplex Containing C-G-Au-C Base Triple


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Dna Duplex Containing C-G-Au-C Base Triple within 5.0Å range: probe atom residue distance (Å) B Occ A:Au101 b:25.0 occ:0.56 N7 A:DG8 1.8 22.5 1.0 N3 A:DC6 1.9 24.3 1.0 C2 A:DC6 2.7 22.3 1.0 O2 A:DC6 2.7 22.1 1.0 C8 A:DG8 2.8 24.4 1.0 C5 A:DG8 2.8 18.4 1.0 C4 A:DC6 2.9 25.6 1.0 N4 A:DC6 3.1 21.0 1.0 O6 A:DG8 3.1 21.1 1.0 C2 A:DC7 3.3 22.7 1.0 C6 A:DG8 3.3 20.9 1.0 N3 A:DC7 3.4 21.5 1.0 O A:HOH211 3.5 26.2 1.0 O2 A:DC7 3.5 21.9 1.0 N1 A:DC7 3.7 22.5 1.0 C4 A:DC7 3.9 24.7 1.0 N9 A:DG8 3.9 24.9 1.0 C4 A:DG8 3.9 21.9 1.0 N1 A:DC6 4.0 23.1 1.0 C6 A:DC7 4.1 22.7 1.0 C5 A:DC6 4.2 23.5 1.0 C5 A:DC7 4.3 25.1 1.0 C1' A:DC7 4.3 27.1 1.0 C6 A:DC6 4.6 23.7 1.0 N4 A:DC7 4.7 21.7 1.0 N1 A:DG8 4.7 18.8 1.0 O4' A:DC7 4.8 27.9 1.0

J.Kondo, E.Iwase. Dna Duplex Containing C-G-Au-C Base Triple To Be Published.