Atomistry » Gold » PDB 1a52-3k3g » 2z7j
Atomistry »
  Gold »
    PDB 1a52-3k3g »
      2z7j »

Gold in PDB 2z7j: Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative

Protein crystallography data

The structure of Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative, PDB code: 2z7j was solved by A.Casanas, A.Navarro, C.Ferrer-Orta, D.Gonzalez, J.F.Rodriguez, N.Verdaguer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.40
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 69.749, 69.749, 71.656, 90.00, 90.00, 90.00
R / Rfree (%) 23.6 / 28.5

Gold Binding Sites:

The binding sites of Gold atom in the Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative (pdb code 2z7j). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total 3 binding sites of Gold where determined in the Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative, PDB code: 2z7j:
Jump to Gold binding site number: 1; 2; 3;

Gold binding site 1 out of 3 in 2z7j

Go back to Gold Binding Sites List in 2z7j
Gold binding site 1 out of 3 in the Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au1

b:70.0
occ:1.00
NE2 A:HIS155 2.5 78.5 1.0
CD2 A:HIS155 3.2 78.4 1.0
OE2 A:GLU157 3.5 85.9 1.0
CE1 A:HIS155 3.6 78.5 1.0
CG A:LYS135 3.7 59.6 1.0
CE A:LYS135 3.9 64.1 1.0
CD A:LYS135 4.4 62.1 1.0
CG A:HIS155 4.5 79.2 1.0
CD A:GLU157 4.5 86.0 1.0
ND1 A:HIS155 4.6 78.8 1.0
CB A:LYS135 4.7 58.5 1.0

Gold binding site 2 out of 3 in 2z7j

Go back to Gold Binding Sites List in 2z7j
Gold binding site 2 out of 3 in the Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 2 of Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au2

b:78.3
occ:1.00
NE2 A:HIS220 3.3 72.3 1.0
CD2 A:HIS220 3.6 72.9 1.0
CE1 A:HIS220 3.9 72.1 1.0
CG A:HIS220 4.3 74.0 1.0
ND1 A:HIS220 4.4 73.9 1.0

Gold binding site 3 out of 3 in 2z7j

Go back to Gold Binding Sites List in 2z7j
Gold binding site 3 out of 3 in the Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 3 of Structural Insights Into De Multifunctional VP3 Protein of Birnaviruses:Gold Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au3

b:0.4
occ:0.50
ND1 A:HIS199 2.4 71.4 1.0
CE1 A:HIS199 3.1 71.3 1.0
CG A:HIS199 3.2 70.4 1.0
CB A:HIS199 3.7 67.8 1.0
NE2 A:HIS199 4.0 71.8 1.0
CD2 A:HIS199 4.1 72.4 1.0
CA A:HIS199 4.7 67.5 1.0
O A:HOH228 4.7 60.1 1.0
O A:ILE197 4.9 60.6 1.0
N A:HIS199 4.9 66.0 1.0

Reference:

A.Casanas, A.Navarro, C.Ferrer-Orta, D.Gonzalez, J.F.Rodriguez, N.Verdaguer. Structural Insights Into the Multifunctional Protein VP3 of Birnaviruses. Structure V. 16 29 2008.
ISSN: ISSN 0969-2126
PubMed: 18184581
DOI: 10.1016/J.STR.2007.10.023
Page generated: Sat Dec 12 01:53:25 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy