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Gold in PDB 1ut7: Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors

Protein crystallography data

The structure of Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors, PDB code: 1ut7 was solved by H.A.Ernst, A.N.Olsen, K.Skriver, S.Larsen, L.Lo Leggio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.9
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.365, 75.302, 80.515, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 24.4

Gold Binding Sites:

The binding sites of Gold atom in the Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors (pdb code 1ut7). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total 4 binding sites of Gold where determined in the Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors, PDB code: 1ut7:
Jump to Gold binding site number: 1; 2; 3; 4;

Gold binding site 1 out of 4 in 1ut7

Go back to Gold Binding Sites List in 1ut7
Gold binding site 1 out of 4 in the Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au1164

b:24.6
occ:0.21
CD1 A:PHE41 3.4 26.7 1.0
CG A:PHE41 3.4 25.8 1.0
CD2 A:PHE41 3.6 26.0 1.0
CE1 A:PHE41 3.6 27.0 1.0
O A:HOH2028 3.8 29.6 1.0
CZ A:PHE41 3.9 26.6 1.0
CE2 A:PHE41 3.9 25.6 1.0
CE2 A:PHE73 4.0 16.2 1.0
O A:HOH2023 4.0 26.3 1.0
O A:ILE46 4.1 23.8 1.0
CB A:PHE41 4.1 25.4 1.0
CA A:GLN44 4.2 35.4 1.0
CB A:GLN44 4.5 36.4 1.0
N A:LEU45 4.5 31.4 1.0
N A:ILE46 4.6 24.6 1.0
CZ A:PHE73 4.7 14.5 1.0
O A:LEU43 4.8 34.1 1.0
CB A:ILE46 4.9 22.6 1.0
CD2 A:PHE73 4.9 15.4 1.0
C A:GLN44 4.9 34.0 1.0
C A:ILE46 5.0 23.7 1.0

Gold binding site 2 out of 4 in 1ut7

Go back to Gold Binding Sites List in 1ut7
Gold binding site 2 out of 4 in the Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 2 of Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au1165

b:26.3
occ:0.13
AU A:AU1165 0.0 26.3 0.1
SG A:CYS33 2.6 25.1 0.5
O A:CYS33 3.2 17.1 1.0
CA A:CYS33 3.6 19.3 1.0
CB A:CYS33 3.6 19.4 0.5
CB A:CYS33 3.6 19.1 0.5
C A:CYS33 3.8 18.6 1.0
SG A:CYS33 4.0 22.2 0.5
CB A:ALA36 4.2 18.8 1.0
N A:ALA37 4.4 18.1 1.0
CB A:ALA37 4.4 17.9 1.0
CD1 A:LEU139 4.5 22.6 1.0
C A:ALA36 4.8 19.0 1.0
CA A:ALA37 4.9 18.4 1.0
AU A:AU1165 4.9 32.9 0.1
N A:CYS33 4.9 17.3 1.0
CA A:ALA36 5.0 18.9 1.0

Gold binding site 3 out of 4 in 1ut7

Go back to Gold Binding Sites List in 1ut7
Gold binding site 3 out of 4 in the Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 3 of Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au1165

b:32.9
occ:0.07
AU A:AU1165 0.0 32.9 0.1
SG A:CYS33 2.3 22.2 0.5
SG A:CYS33 2.9 25.1 0.5
CB A:CYS33 3.2 19.4 0.5
CB A:CYS33 3.2 19.1 0.5
CG2 A:VAL29 4.0 20.9 1.0
CA A:VAL29 4.2 19.6 1.0
CG1 A:VAL111 4.3 26.9 1.0
CG1 A:VAL29 4.3 22.8 1.0
CB A:VAL29 4.4 19.9 1.0
CB A:VAL111 4.5 23.9 1.0
O A:MET28 4.5 19.4 1.0
CA A:CYS33 4.6 19.3 1.0
AU A:AU1165 4.9 26.3 0.1
N A:VAL29 4.9 18.5 1.0
C A:MET28 5.0 18.3 1.0
O A:VAL29 5.0 19.2 1.0

Gold binding site 4 out of 4 in 1ut7

Go back to Gold Binding Sites List in 1ut7
Gold binding site 4 out of 4 in the Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 4 of Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Au1164

b:30.8
occ:0.10
SG B:CYS33 1.6 22.8 0.5
SG B:CYS33 2.2 25.9 0.5
CB B:CYS33 2.3 19.9 0.5
CB B:CYS33 2.4 20.2 0.5
CA B:CYS33 2.9 19.7 1.0
C B:CYS33 3.6 19.8 1.0
O B:CYS33 3.6 20.7 1.0
O B:HOH2080 3.8 27.1 1.0
N B:CYS33 4.2 17.9 1.0
CD1 B:LEU139 4.5 22.7 1.0
CD2 B:LEU139 4.5 22.1 1.0
N B:ARG34 4.7 19.3 1.0

Reference:

H.A.Ernst, A.N.Olsen, K.Skriver, S.Larsen, L.Lo Leggio. Structure of the Conserved Domain of Anac, A Member of the Nac Family of Transcription Factors Embo Rep. V. 5 297 2004.
ISSN: ISSN 1469-221X
PubMed: 15083810
DOI: 10.1038/SJ.EMBOR.7400093
Page generated: Sat Dec 12 01:53:08 2020

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