Atomistry » Gold » PDB 1a52-3k3g » 1h9t
Atomistry »
  Gold »
    PDB 1a52-3k3g »
      1h9t »

Gold in PDB 1h9t: Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator

Protein crystallography data

The structure of Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator, PDB code: 1h9t was solved by D.M.F.Van Aalten, C.C.Dirusso, J.Knudsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 12.00 / 3.25
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 92.992, 92.992, 334.826, 90.00, 90.00, 120.00
R / Rfree (%) 26.4 / 32

Other elements in 1h9t:

The structure of Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Gold Binding Sites:

The binding sites of Gold atom in the Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator (pdb code 1h9t). This binding sites where shown within 5.0 Angstroms radius around Gold atom.
In total 2 binding sites of Gold where determined in the Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator, PDB code: 1h9t:
Jump to Gold binding site number: 1; 2;

Gold binding site 1 out of 2 in 1h9t

Go back to Gold Binding Sites List in 1h9t
Gold binding site 1 out of 2 in the Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 1 of Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Au1240

b:68.8
occ:0.20
SG A:CYS200 2.6 70.0 1.0
O A:CYS200 3.2 78.8 1.0
C A:CYS200 3.4 79.0 1.0
CB A:CYS200 3.5 76.7 1.0
CG A:GLN125 3.6 98.0 1.0
O A:PRO121 3.6 99.9 1.0
N A:SER201 3.7 82.7 1.0
OG A:SER201 3.8 88.5 1.0
CA A:SER201 3.9 87.2 1.0
CA A:CYS200 4.2 76.6 1.0
C A:PRO121 4.2 99.9 1.0
NE2 A:GLN125 4.2 99.9 1.0
CD A:GLN125 4.3 99.9 1.0
CB A:SER201 4.4 87.3 1.0
CB A:PRO121 4.5 99.9 1.0
N A:ASP122 4.7 99.7 1.0
CB A:GLN125 4.8 94.8 1.0
CA A:ASP122 4.8 99.2 1.0
CA A:PRO121 5.0 99.9 1.0

Gold binding site 2 out of 2 in 1h9t

Go back to Gold Binding Sites List in 1h9t
Gold binding site 2 out of 2 in the Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator


Mono view


Stereo pair view

A full contact list of Gold with other atoms in the Au binding site number 2 of Fadr, Fatty Acid Responsive Transcription Factor From E. Coli in Complex with Fadb Operator within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Au1231

b:57.2
occ:0.20
O B:CYS200 1.4 94.7 1.0
C B:CYS200 1.6 95.0 1.0
CA B:CYS200 1.7 92.7 1.0
CB B:CYS200 2.4 91.3 1.0
SG B:CYS200 2.5 81.0 1.0
N B:SER201 3.0 97.5 1.0
N B:CYS200 3.1 93.6 1.0
O B:LEU199 3.5 93.9 1.0
C B:LEU199 3.7 94.2 1.0
CD2 B:PHE117 3.7 97.9 1.0
CB B:PRO121 3.9 99.9 1.0
CA B:SER201 4.0 99.5 1.0
CE2 B:PHE117 4.1 99.9 1.0
N B:GLY203 4.5 99.9 1.0
CA B:PRO121 4.6 99.8 1.0
C B:SER201 4.7 99.9 1.0
N B:GLU202 4.7 99.9 1.0
O B:PRO121 4.7 99.8 1.0
CA B:GLY203 4.8 99.9 1.0
CG B:PHE117 4.9 95.8 1.0
C B:PRO121 4.9 99.8 1.0

Reference:

D.M.F.Van Aalten, C.C.Dirusso, J.Knudsen. The Structural Basis of Acyl Coenzyme A-Dependent Regulation of the Transcription Factor Fadr Embo J. V. 20 2041 2001.
ISSN: ISSN 0261-4189
PubMed: 11296236
DOI: 10.1093/EMBOJ/20.8.2041
Page generated: Sat Dec 12 01:53:00 2020

Last articles

Tb in 6TVY
Si in 6Y7O
Rh in 6WRM
Rh in 6WRL
Ni in 6Y8Z
Ni in 6Y8Y
Na in 6ZXZ
Na in 7ACG
Na in 6YLS
Na in 6Y8Z
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy